Pf AmpliSeq Peru of P. falciparum - SRA

SRX23579433: Pf AmpliSeq Peru of P. falciparum
1 ILLUMINA (Illumina MiSeq) run: 365,141 spots, 144.9M bases, 91.3Mb downloads

Design: Custom Amplicon Pf AmpliSeq Peru

Submitted by: Universidad Peruana Cayetano Heredia

Study: Pf AmpliSeq Remote Peru

PRJNA1074830 • SRP488996 • All experiments • All runs

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Here, we apply a modified highly-multiplexed deep sequencing assay: Pf AmpliSeq Peru. The tool targets a newly developed 28-SNP Peru barcode for parasite population analysis within Peru, 11 putative drug resistance genes and pfhrp2/3 genes. It was applied to 90 samples from remote and indigenous communities in the Peruvian Amazon (2016-2020), generating baseline surveillance data.

Sample:

SAMN39892914 • SRS20424589 • All experiments • All runs

Organism: Plasmodium falciparum

Library:

Name: 82_S83

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: GENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 365,141 spots, 144.9M bases, 91.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR27921333	365,141	144.9M	91.3Mb	2024-02-08

ID:: 31848734

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